BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB011B11LP1|AL426166
(784 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig783 571 e-163
3x_Contig1620 389 e-108
>3x_Contig783
Length = 2733
Score = 571 bits (288), Expect = e-163
Identities = 288/288 (100%)
Strand = Plus / Plus
Query: 497 cgactctttaagcagtaactaaacgttgagcatgcagccggtattttcaaggtttccata 556
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9 cgactctttaagcagtaactaaacgttgagcatgcagccggtattttcaaggtttccata 68
Query: 557 cgcctccaaatcgggctttatttcactggcttccagaggttatgcggtgtcacggaattc 616
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 69 cgcctccaaatcgggctttatttcactggcttccagaggttatgcggtgtcacggaattc 128
Query: 617 aggttccagtatcaagtccaatttaagatcgaagcccagagcagacacgagatggaacac 676
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 129 aggttccagtatcaagtccaatttaagatcgaagcccagagcagacacgagatggaacac 188
Query: 677 caaagcgaaaccgccggtgaagaataggaaaagtaatgggaaaggtgatcacaggtcaca 736
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 189 caaagcgaaaccgccggtgaagaataggaaaagtaatgggaaaggtgatcacaggtcaca 248
Query: 737 ttcgaggagcgattcccgcgcaaagccctcacaagagcagacgcaaca 784
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 ttcgaggagcgattcccgcgcaaagccctcacaagagcagacgcaaca 296
>3x_Contig1620
Length = 12263
Score = 389 bits (196), Expect = e-108
Identities = 201/203 (99%)
Strand = Plus / Plus
Query: 1 acttttttcagtagagcttatttccttcggaaattcctcaattacgatagcaatgagtcg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12061 acttttttcagtagagcttatttccttcggaaattcctcaattacgatagcaatgagtcg 12120
Query: 61 atggatctctatcgtgagaaaactattcgttggtccctatgaagtgaatttcgataatcc 120
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 12121 atggatctctatcgtgagacaactattcgttggtccctatgaagtgaatttcgataatcc 12180
Query: 121 atttttttcttcaactttttttcattgttgcaatgttaaaagaatgaaaaaaatggcaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 12181 atttttttcttcaactttttttcattgttgcaatgttaaaagaatgaaanaaatggcaaa 12240
Query: 181 gatctggatgagcatatgtgaaa 203
|||||||||||||||||||||||
Sbjct: 12241 gatctggatgagcatatgtgaaa 12263
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7375
Number of Sequences: 1807
Number of extensions: 7375
Number of successful extensions: 403
Number of sequences better than 1.0e-20: 2
length of query: 784
length of database: 10,358,551
effective HSP length: 16
effective length of query: 768
effective length of database: 10,329,639
effective search space: 7933162752
effective search space used: 7933162752
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)